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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: in-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSPASLPS EAFSSSNSSL SNSYSDGSDL ANWEEYVSTD GSLFYMEYVR CEKTGVSAER  60
   61 RVEFMRRSLR LGKKSSRRQP HSNNQNQSQN QNQSHGPSRL DSQTEPQEFR FSQFKTAAPD 120
  121 PKKLDLVITA ADRFRFGRRS TAVESILGFR VLPFPDQPEC LMVDGFVHDV SALQHGIKRG 180
  181 DWFRSLNGIE VYASNVDELL KQFVEPTQVC LGFQSCGAAS AVSPTDPGYN RNVREEQVCK 240
  241 VENFPMFTEK FEQMLITEGN FGIPGSSVDI RMPFAMLLLP PECYQHEQQQ DSLYYFPEIP 300
  301 DNFLFKARGS FLTLHAVLSE LHTQPLSSRL LVDQVQYHVN YRQLNGFLVL FAYAGGLCCA 360
  361 AECSLRSDEL IGYIRFSLPG LVLESFNQER EPGNSSRLKL FLRHFCEIQR TRLVARCHGH 420
  421 IRFEELLGQS RSLPLPKEAQ LRIFDALSEM EAMDYRNWND EPLTTHREFF IYGSALYYDG 480
  481 FLVASLLPPE VRVSVEGFLR CRGIFELLGA APGIKVREMY VWEEIVLPSA TGRYFLTICT 540
  541 KNHLSLAVIL KIFDAPDMAP DAVVGPSLFY IEEIQETLDH LVQCGIESLA MFWSVSNKRP 600
  601 EVLDATASES RDQEKEPNNR LESFLKQKLT VLSPSVEEEA QLCSSLGGSS IHSLTPSEDE 660
  661 SCRRRLTPIH GTAEDSDSGS DWENFAVQHP LHYGLNLGAE SHSQSQMTES MWKEINNVVP 720
  721 VKISAGWKNS VLHYVYIDIA NGSLFAPFTD SSENSNYLSE IRQACHIIHA VLQKSKHYRR 780
  781 HLSESSRAQT NSNGHSSHTV SLVKEHGMIL EVSTQPKSDG QSQSSTSSRF VVVGRLFQSP 840
  841 AKEVYVCHRS DVPQNIVEMA FRLSFFSMG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle