YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7293687, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPTISGALT FNATLICSLV VNGTKMNDPR ACNAWIQCID GSPVSGSCAT GLFYDRESQK  60
   61 CLSSSSIKCL SSDPCAALPT GFAADPYSCN GYYYCKDGKG THGVCNTGMN FNSGTQDCIR 120
  121 DFPCSNKMDP DSYCNILPDG VFVKDTDNCN GYQLCWDGQV INGTCPGTFY FKASTAQCDY 180
  181 PQNVECDFVP VPDISKKGVC PETGGFISDN KTCNGYYYCK DLGNGEFSLE HGVCSDGRFF 240
  241 LATDGGACVP RSKVKCGYDR CVGLGNSTIQ LANESDDGCR GYSICQDGIV IGQGTCPQDE 300
  301 YFDEITQRCT TQVISYTACQ ISEATTGSQV PSGTTTTTSS TITSTTIAVP VS

Type	Start	End	Confidence
Signal Peptide	1	23	0.70
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	352	0.99