YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kug-PA, kug-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIKKYVTPV KRKAFTILQW ISLLCSLWLI PTVQSKADEK HTATLEYRLE NQLQDLYRFS  60
   61 HSVYNVTIPE NSLGKTYAKG VLHERLAGLR VGLNAEVKYR IISGDKEKLF KAEEKLVGDF 120
  121 AFLAIRTRTN NVVLNREKTE EYVIRVKAHV HLHDRNVSSY ETEANIHIKV LDRNDLSPLF 180
  181 YPTQYTVVIP EDTPKYQSIL KVTADDADLG INGEIYYSLL MDSEYFAIHP TTGEITLLQQ 240
  241 LQYAENSHFE LTVVAYDRGS WVNHQNHQAS KTKVSISVKQ VNFYAPEIFT KTFSSVTPTS 300
  301 NPLIYGIVRV NDKDTGINGN IGRLEIVDGN PDGTFLLKAA ETKDEYYIEL NQFAHLNQQH 360
  361 FIYNLTLLAE DLGTPRRFAY KSVPIQIKPE SKNIPIFTQE IYEVSIPETA PINMPVIRLK 420
  421 VSDPDLGKNA LVYLEIVGGN EGDEFRINPD SGMLYTAKQL DAEKKSSYTL TVSAIDQANV 480
  481 GSRKQSSAKV KISVQDMNDN DPIFENVNKV ISINENNLAG SFVVKLTAKD RDSGENSYIS 540
  541 YSIANLNAVP FEIDHFSGIV KTTSLLDFET MKRNYELIIR ASDWGLPYRR QTEIKLSIVV 600
  601 KDINDNRPQF ERVNCYGKVT KSAPMGTEVF VTSAIDFDAG DIISYRLSDG NEDGCFNLDP 660
  661 TSGSLSISCD LKKTTLTNRI LKVSATDGTH FSDDLIINVH LMPEDLGGDS SILHGFGSFE 720
  721 CRETGVARRL AETLSLAEKN NVKSASPSVF SDLSLTPSRY GQNVHRPEFV NFPQELSINE 780
  781 SVQLGETVAW IEAKDRDLGY NGKLVFAISD GDYDSVFRID PDRGELQIIG YLDRERQNEY 840
  841 VLNITVYDLG NPTKSTSKML PITILDVNDN RPVIQKTLAT FRLTESARIG TVVHCLHATD 900
  901 ADSGINAQVT YALSVECSDF TVNATTGCLR LNKPLDREKQ DNYALHITAK DGGSPVLSSE 960
  961 ALVYVLVDDV NDNAPVFGVQ EYIFKVREDL PRGTVLAVIE AVDEDIGPNA EIQFSLKEET1020
 1021 QDEELFRIDK HTGAIRTQGY LDYENKQVHN LIVSAIDGGD PSLTSDMSIV IMIIDVNENR1080
 1081 FAPEFDDFVY EGKVKENKPK GTFVMNVTAR DMDTVDLNSK ITYSITGGDG LGIFAVNDQG1140
 1141 SITSLSQLDA ETKNFYWLTL CAQDCAIVPL SNCVEVYIQV ENENDNIPLT DKPVYYVNVT1200
 1201 EASVENVEII TLKAFDPDID PTQTITYNIV SGNLVGYFEI DSKTGVIKTT ERKLDRENQA1260
 1261 EHILEVAISD NGSPVLSSTS RIVVSVLDIN DNSPEFDQRV YKVQVPSSAT VNQSIFQVHA1320
 1321 IDSDSGENGR ITYSIKSGKG KNKFRIDSQR GHIHIAKPLD SDNEFEIHIK AEDNGIPKKS1380
 1381 QTARVNIVVV PVNPNSQNAP LIVRKTSENV VDLTENDKPG FLVTQILAVD DDNDQLWYNI1440
 1441 SNGNDDNTFY IGQDNGNILL SKYLDYETQQ SYNLTISVTD GTFTAFTNLL VQVIDINDNP1500
 1501 PQFAKDVYHV NISENIEEES VIMQLHATDR DEDKKLFYHL HATQDPSSLA LFRIDSISGN1560
 1561 VIVTQRLDFE KTAQHILIVF VKDQGAPGKR NYAKIIVNVH DHNDHHPEFT AKIIQSKVPE1620
 1621 SAAIGSKLAE VRAIDRDSGH NAEIQYSIIT GNVGSVFEID PTFGIITLAG NLNINKIQEY1680
 1681 MLQVKAVDLG NPPLSSQIPV HIIVTMSEND PPKFPTNNIA IEIFENLPIG TFVTQVTARS1740
 1741 SSSIFFNIIS GNINESFRIN PSTGVIVING NIDYESIKVF NLTVKGTNMA AESSCQNIII1800
 1801 HILDANDNIP YFVQNEYVGA LPESAAIGSY VLKVHDSSKD HLTLQVKDAD VGVNGMVEYH1860
 1861 IVDDLAKNFF KIDSTTGAIE LLRQLDYETN AGYTFDVTVS DMGKPKLHST TTAHVTIRVI1920
 1921 NVNDCPPVFN ERELNVTLFL PTFENVFVRQ VSAKDADNDT LRFDIVDGNT NECFQIEKYT1980
 1981 GIITTRNFEI LNNENDRDYA LHVRASDGIF SAILIVKIKV LSAIDSNFAF QRESYRFSAF2040
 2041 ENNTKVATIG LVNVIGNTLD ENVEYRILNP TQLFDIGISS GALKTTGVIF DREVKDLYRL2100
 2101 FVEAKSMLYD GMNSNVRRAV TSIDISVLDV NDNCPLFVNM PYYATVSIDD PKGTIIMQVK2160
 2161 AIDLDSAENG EVRYELKKGN GELFKLDRKS GELSIKQHVE GHNRNYELTV AAYDGAITPC2220
 2221 SSEAPLQVKV IDRSMPVFEK QFYTVSVKED VEMYSALSVS IEAESPLGRS LIYTISSESQ2280
 2281 SFEIDYNTGS IFVVNELDYE KISSHDVSIR ATDSLSGVYA EVVLSVSIMD VNDCYPEIES2340
 2341 DIYNLTIPEN ASFGTQILKI NATDNDSGAN AKLSYYIESI NGQNNSELFY IDVTDGNLYL2400
 2401 KTPLDYEQIK YHHIVVNVKD HGSPSLSSRS NVFITGRILC RFISYKLIYD SIIPVKDLND2460
 2461 NAPCFVEPSY FTKVSVAAVR GQFVALPKAY DKDISDTDSL EYKIVYGNEL QTYSIDKLTG2520
 2521 VISLQNMLNF TDKSSTVLNI SVSDGVHTAY ARLKISLLPE NVYSPLFDQS TYEAQVPENL2580
 2581 LHGHNIITVK ASDGDFGTYA NLYYEIVSEE MKKIFLIDQT TGVITSKVTF DREKKDEYVV2640
 2641 LLKVSDGGGK FGFASLKVIV VDVNDNVPYF LLKEYKMVVS TTVEANQTIL TVKAKDDDIV2700
 2701 DNGSVHFQIV QKSNDKAVKD VIEINEKTGD IVFKSKAESY GVNSYQFFVR ASDRGEPQFH2760
 2761 SEVPVSIEII ETDANIPTFE KSSVLLKIIE STPPGTVLTK LHMIGNYTFK FSIAADQDHF2820
 2821 MISDSGELIL QQTLDREQQE SHNLIVVAET STVPVFFAYA DVLIDVRDEN DNYPKFDNTF2880
 2881 YSASVAENSE KVISLVKVSA TDADTGPNGD IRYYLESDTE NIQNIFDIDI YSGWITLLTS2940
 2941 LDREVQSEYN FKVIAADNGH PKHDAKVPVT IKIVDYNDNA PVFKLPIEGL SVFENALPGT3000
 3001 VLINLLLIDP DIEKQEMDFF IVSGDKQAQF QIGKSGELFI AKPLDREQLM FYNLSIIATD3060
 3061 GKFTAKANVE IDVKDINDNT PYCLKPRYHI STNESISIGT TLVEVKAIDF DFQSKLRFYL3120
 3121 SGKGADDFSI GKESGILKVA SALDRETTPK YKLVAHVQDG KDFTQECFSE IIITVNDIND3180
 3181 NMPIFSMAQY RVSVPEDAQL NTLITKVHAM DKDFGVNRQI KYSLMGENHD YFKISKSTGI3240
 3241 IRLHKSLDRE TISLFNLTVK AEDCGVPKLH SIATVAVNIL DINDNPPEFS MRQYSCKILE3300
 3301 NATHGTEVCK VYATSIDIGV NADIHYFIMS GNEQGKFKMD STTGDLVLNA TLDYEMSKFY3360
 3361 FLTIQAIDGG TPPLSNNAYV NISILDINDN SPTFLQNLYR INVNEDIFVG SKILDVKATD3420
 3421 EDSDVNGLVT YNIERGDNIG QFSIDPKNGT ISVSRPLDRE TISHYTLEIQ ACDQGDPQRC3480
 3481 NSVPININIL DTNDNAPIFS SSNYSVVLQE NRLLGYVFLT FKISDADETP NTTPYTFDIR3540
 3541 SGNEGGLFRL EQDGSLRTAS RFNHNLQDEF VIQVRVFDNG TPPLYSDAWV VVKIIEESQY3600
 3601 PPIVTPLEVT INSFEDDFSG AFIGKVHASD QDKYDELNFS LVSGPDDMYQ SSKLFNISNN3660
 3661 TGKIYAISNL DIGLYKLNVS VSDGKFHVFS IVKINVELVT NDMLKESVVI RFRRISASEF3720
 3721 LLSHRKTFMR SIRNIMRCRQ KDVILITLQS DYQKASQHAV GNRRARSIDS DLNVVFAVRK3780
 3781 QQIIPDSDEF FTSDEIRQTL IDKKNEIENE TNLVVEDVLP STCQSNKNDC VHGECKQILQ3840
 3841 ILKNNVTTTF TDVISFAAPS YIPVNTCVCR PGFDGKHCKE TVNACSTDPC SPQRICMPSG3900
 3901 SALGYQCVCP KGFSGTYCER KSSKCSNESC DMGLFTAVSF GGKSYAHYKI NKVKAKFTLE3960
 3961 NGFSYSLQIR TVQQTGTLLY ASGKVDYNIL EIINGAVQYR FDLGSGEGVI SVSSINISDG4020
 4021 EWHQISLERS LNSAKVMVDN KHVSHGSAPG VNGILNIQSN DIFVGAEVRP HPSIIGYEDI4080
 4081 QRGFIGCMAN IKIAKESLPL YISGGSTIAA LKRFTNVEFK CDPSNVLVRL GICGSQPCAN4140
 4141 SGICKELDTD VFECACQPRY SGKHCEIDLD PCSSGPCLFG GRCDYHGPNN YSCTCPIHLS4200
 4201 GKRCEYGKFC TPNPCKNGGI CEEGDGISHC MCRGYTGPTC EIDVDECENQ PCGNGATCIN4260
 4261 EPGSFRCICP SYLTGASCGD PLYSNSISTK LKNFSIEHIS GIISGVAVVL VIISCVLCCV4320
 4321 VLKRSSSSKR RNRLEKDKNK SSYKEANLNS LVDKDNYCKP NVKLSNLEVN QRPISYTAVP4380
 4381 NDNLVLSNRN FVNNLDILRS YGSAGDELEN VPFEYQKVNR NKQHVNINSC HSTDADNAYK4440
 4441 QEWCEQMHLR TFSENKLNNE LKRDFGPSVS RFSTGKLIQV EMPNVCHSSS ANFVDYSALA4500
 4501 NGQYHWDCSD WVRKSHNPLP DITEVPGAEI ADSSSLHSND SNESKSKKAF FVHREDGDVD4560
 4561 PTRDIAALNE DIGSEYLDSE AESCLEPFML PRSSNQPLSR LSSFNNIENE DYKSNTGKVY4620
 4621 LRHPDSYLPT MHFPSETDGE SSMTEGPISR MEIKTRRTIS ENSEEAYLFP CTVGEIGSNS4680
 4681 NISVRLCEIE DSELEEFLPQ QQTNN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle