YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194197585, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEMNKTAIG IAAGVAGTLF IGYCIYFDKK RRSDPEYKKK VRERRRRNKK TGTAKSGVPN  60
   61 LNDHEAIERY FLQEIQLGET LIARGDFESG VEHLANAIVV CGQPARLLQV LQSSLPAQVF 120
  121 AMLIVKMQEF GNRAAEGNDG PIVLGQSSEQ QLDGAKIIEC SSGNASIDDL E

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.73
Transmembrane Helix	7	27	0.91
Cytoplasmic	28	171	0.71