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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: trpml-PA, CG42638-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSYGPGAQT APAVKRRTDS YEAAQQQQQS PESDEEYVNT RILRRQVQLQ STPVAPVVPM  60
   61 PISAGSGTAP PSVDGREEQP EFPGSSAASY QEERMRRKLQ FFFMNPIEKW QAKRKFPYKF 120
  121 VVQIVKIFLV TMQLCLFAHS RYNHINYTGD NRFAFSHLFL RGWDSSREVE SYPPAVGPFA 180
  181 LYLKSEFFDT VQYAVNGYAN VSRSIGPYDY PTPNNTMPPL KLCLQNYREG TIFGFNESYI 240
  241 FDPHIDEVCE RLPPNVTTIG VENYLRQRDV EVNFASLVSA QLTFKIKTVN FKANGGPLSA 300
  301 PDCFRFDISI TFNNRDHDGQ MLLSLDAEAT RLKCHGATDF ISDANFDSML RSVLNIFVLL 360
  361 TCALSFALCT RALWRAYLLR CTTVNFFRSQ FGKELSFDGR LEFVNFWYIM IIFNDVLLII 420
  421 GSALKEQIEG RYLVVDQWDT CSLFLGIGNL LVWFGVLRYL GFFKTYNVVI LTLKKAAPKI 480
  481 LRFLIAALLI YAGFVFCGWL ILGPYHMKFR SLATTSECLF ALINGDDMFA TFATLSSKAT 540
  541 WLWWFCQIYL YSFISLYIYV VLSLFIAVIM DAYDTIKAYY KDGFPTTDLK AFVGTRTAED 600
  601 ISSGVFMTDL DDFDQTSFLD VVKSICCCGR CGRHQEPAQP NSGYTSLSSI MK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle