YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG14077-PB, FBpp...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHLQLMKYV NPRFAINTVI TQRLMSKSDG KSSGTGSKDA KCKGTKDAKS SNAAKKSTEA  60
   61 KAKASDAAKK ATPPKAAKET KVTPPKDETA IAGGSKCPPK VQPVAETSKN KKKLQSCDEL 120
  121 LLGKSTRKQK KPLTAIQGGD LGCPGRTGKK PQIVAQHSKL WQKISLFGVL PMIAILTLLV 180
  181 FSTRSEEERL EFKNYEHMYR RTKRYWFKDG NRTAFHNSHF NALPPAGYED EVDESGIGQD 240
  241 PETDKDKKAR MKEFDKVVKN WRKHSSKRDA QLKKEAAAAE KEARKQEAQ

Type	Start	End	Confidence
Cytoplasmic	1	159	0.78
Transmembrane Helix	160	182	0.81
Non-Cytoplasmic	183	289	0.86