YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gk-PB
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALIDTAWRC RLMIFVIVSL LLVGDLFGYG GGMKSNHPNP HSVRSARGAV PGGAPTGPAA  60
   61 AAASKFQTKN AEIDITEEHD FNELSAAAQS LKPGMAVVTG ASLKTKSQLT DAIKESCLPK 120
  121 MLCELASKAD YQLSEKEREL LRLIRSPTMP WMMNMPPSKW YFAAHMGELM RHTGDNLSGP 180
  181 MGCANLWPNC PISSKKLMKL SYKVRV

Type	Start	End	Confidence
Cytoplasmic	1	11	0.69
Transmembrane Helix	12	32	0.78
Non-Cytoplasmic	33	206	0.92