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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Prestin-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSDKESPET KPLNNNNTNG NGGSVPSKPK IQPKYSIHRD VLTHEVVIKQ TGYAARDKSI  60
   61 PSSLRNCWRS WNFFALFTGV IPILQWLPQY SPRRDLPGDI IAGFTVAIMN IPHGMAYGIL 120
  121 AGVSAGNGLY MAVFPVLAYM FLGTSKHISI GTFAVASMMT AKVVDTYANV DDHHQILPIN 180
  181 AFGLQSNGTA TASPLLLINS SALADSVSST TISPFQLLNS TLNADPITKI EVATSLALTV 240
  241 GIVNLLMAFL RLGTLSSLLS EPLVNGFTTA AACHVVTAQL KDVLGISVPR HKGAFKIIYT 300
  301 VIDVIKGVPQ TNLVNFGFCM AVIAFMMICN EILKPRLSKK CRFPLPAELI MVIGGTLISK 360
  361 WFNLYVDYNV NPVGKIPSGL PEPVLPRLDL VPKVAVDSIA IAIVTYSIIM SMGLTFAKKH 420
  421 GYEVRPNQEL FAMGIGNMVG GCFSCIPMAC SLSRSVIQDQ TGGVSQIASL VSASLVVVTL 480
  481 MWIGPFFSSL PRCVLAGVII VALKPMFMQA KELKKFSKQG KLEMFTWIST FLCVVIIDID 540
  541 IGLLIGICIS LLALYIKGLK PYSCLLGYMP EAPGIYMDLN QHRNAMQVPE VRIFRYSGSL 600
  601 NFATSLFFRR ALYEAVGLDK IPLTKVSSSN SNSPSKGSKS SYSPVSQNGG KAINGKLEET 660
  661 SGAFKVLVLD FSMLGHIDVA GCRTLTDLSK ELKVRGARLL LASPVDRVYD TLVHSMALSE 720
  721 GPFEIFPTLH DCVEYANACR TA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle