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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Eip74EF-PD, Eip7...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.67
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMVQHLVAA SAHNFASQAA ASLVNVSSSS SSSSSSSSSS LSLSSSSSSS SLSSATPTPV  60
   61 ASPVTPTSPP PAAAAPAEAS PPAGAELQED GQQAKTQEDP TMKDQDMLEK TRQEVKDPVN 120
  121 VEEPGAIVDT ESVMARQSPS PVASTKVPES LEEISNKSPP VQEDEEESES VASDCREFKV 180
  181 LYNHLRQQQH HHSPSSPDKT RSTLDDVSKI LWERKQQLQR SSVITAAPTL QPQQHQQPMS 240
  241 DIEDEETLED VDDADADVEA DAEDEELLEQ YQNGYDSPLD LSLGGATSAA ASAAAAASAV 300
  301 SRRRGRTYSG TESDDSAQCE RARMRLKPER KAERSAAYKK SLMKRYYTEI PIVKQSTSPA 360
  361 PQQQLQQQHH LQQQQQQQPH NGSTFAGATA LLHIKTEQNT LLTPLQLQQQ QQQQQGLHGA 420
  421 AGNGGSSNGN NAHQQQQPLA IPQRPLLHNL LSGGAIHNPH HRNYTTATTG SFPPSPADSG 480
  481 VSDVDSSSSG GQPCADELKA RLGMPPATSA SAAAAAAAAA AAAAHLHTGT FLHPNLYQNN 540
  541 AANSLRNIWN RSVGVPDNYY GSSGAGSGGT QPGGPGNPQT PGYLTTSYFN APTAATAAAS 600
  601 QRGTTINGYH SLHQQQQQQQ QSQQSQQQQQ LAHQQLSHQQ QQALHQQLSH QQQQQQQQQQ 660
  661 QHPHSQLNGP HPHSHPHSHP HSHPHAGQHT HSTIAAAAAA AAASVVSSSS SAVAAAAMLS 720
  721 ASAAAAATAA AAAGGSQSVI QPATSSVSYD LSYMLELGGF QQRKAKKPRK PKLEMGVKRR 780
  781 SREGSTTYLW EFLLKLLQDR EYCPRFIKWT NREKGVFKLV DSKAVSRLWG MHKNKPDMNY 840
  841 ETMGRALRYY YQRGILAKVD GQRLVYQFVD VPKDIIEIDC NGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle