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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0305335, CycT-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLATPMPQ AATASSSSSA SAAASASGIP ITANNNLPFE KDKIWYFSND QLANSPSRRC  60
   61 GIKGDDELQY RQMTAYLIQE MGQRLQVSQL CINTAIVYMH RFYAFHSFTH FHRNSMASAS 120
  121 LFLAAKVEEQ PRKLEHVIRA ANKCLPPTTE QNYAELAQEL VFNENVLLQT LGFDVAIDHP 180
  181 HTHVVRTCQL VKACKDLAQT SYFLASNSLH LTSMCLQYRP TVVACFCIYL ACKWSRWEIP 240
  241 QSTEGKHWFY YVDKTVSLDL LKQLTDEFIA IYEKSPARLK SKLNSIKAIA QGASNRTANS 300
  301 KDKPKEDWKI TEMMKGYHSN ITTPPELLNG NDSRDRDRDR ERERERERDP SSLLPPPAMV 360
  361 PQQRRQDGGH QRSSSVSGVP GSSSSSSSSS HKMPNYPGGM PPDAHTDHKS KQPGYNNRMP 420
  421 SSHQRSSSSG LGSSGSGSQR SSSSSSSSSQ QPGRPSMPVD YHKSSRGMPP VGVGMPPHGS 480
  481 HKMTSGSKPQ QPQQQPVPHP SASNSSASGM SSKDKSQSNK MYPNAPPPYS NSAPQNPLMS 540
  541 RGGYPGASNG SQPPPPAGYG GHRSKSGSTV HGMPPFEQQL PYSQSQSYGH MQQQPVPQSQ 600
  601 QQQMPPEASQ HSLQSKNSLF SPEWPDIKKE PMSQSQPQPF NGLLPPPAPP GHDYKLNSHP 660
  661 RDKESPKKER LTPTKKDKHR PVMPPVGSGN SSSGSGSSKP MLPPHKKQIP HGGDLLTNPG 720
  721 ESGSLKRPNE ISGSQYGLNK LDEIDNSNMP REKLRKLDTT TGLPTYPNYE EKHTPLNMSN 780
  781 GIETTPDLVR SLLKESLCPS NASLLKPDAL TMPGLKPPAE LLEPMPAPAT IKKEQGITPM 840
  841 TSLASGPAPM DLEVPTKQAG EIKEESSSKS EKKKKKDKHK HKEKDKSKDK TEKEERKKHK 900
  901 KDKQKDRSGS GGSKDSSLPN EPLKMVIKNP NGSLQAGASA PIKLKISKNK VEPNNYSAAA 960
  961 GLPGAIGYGL PPTTATTTSA SIGAAAPVLP PYGAGGGGYS SSGGSSSGGS SKKKHSDRDR1020
 1021 DKESKKNKSQ DYAKYNGAGG GIFNPLGGAG AAPNMSGGMG APMSTAVPPS MLLAPTGAVP1080
 1081 PSAAGLAPPP MPVYNKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle