YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|220956892, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSARSSGLVA AAALPVPSSS SSVAGGDVPR PPPRRRAASV AGQQQTRQEF GNGYTPRRSL  60
   61 AAVNDSGDSC HLRIVVLTGQ SLAKKDIFGA SDPYVRIDLN TINGDINIDS VLTKTKKKTL 120
  121 NPTWNEEFIF RVKPSEHKLV FQVFDENRLT RDDFLGMVEL TLVNLPTEQE GRTIGEQSYT 180
  181 LRPRRSVGAK SRIKGTLRIY HAFIRETREQ SEPSSGNSDG EWEHVEATNA GETSAQPHPF 240
  241 PTGGHDALPA GWEERQDANG RTYYVNHTAR TTQWDRPTVL NSHSSQSTDD QLASDFQRRF 300
  301 HISVDDTESG RSANEDTDHT DSHNPSDISA PSTRRNSEED NAAVPPMEQN TGGEEEPLPP 360
  361 RWSMQVAPNG RTFFIDHASR RTTWIDPRNG RASPMPNQTR RVEDDLGPLP EGWEERVHTD 420
  421 GRVFYIDHNT RTTQWEDPRL SNPNIAGQAV PYSRDYKQKY EYFKSHIRKP TNVPNKFEIR 480
  481 IRRTSILEDS YRIISSVTKT DLLKTKLWVE FEGETGLDYG GLAREWFYLL SKEMFNPYYG 540
  541 LFEYSAMDNY TLQINNGSGL CNEEHLSYFK FIGRIAGMAV YHGKLLDAFF IRPFYKMMLQ 600
  601 KPIDLKDMES VDTEYYNSLM WIKENDPRIL ELTFCLDEDV FGQKSQHELK PGGANIDVTN 660
  661 ENKDEYIKLV IEWRFVARVK EQMSSFLDGF GSIIPLNLIK IFDEHELELL MCGIQNIDVK 720
  721 DWRENTLYKG DYHMNHIIIQ WFWRAVLSFS NEMRSRLLQF VTGTSRVPMN GFKELYGSNG 780
  781 PQMFTIEKWG TPNNFPRAHT CFNRLDLPPY EGYLQLKDKL IKAIEGSQGF AGVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle