YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Or74a-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFHRYRPRL PGGELAPMPW PVSLYRVLNH VAWPLEAESG RWTVFLDRLM IFLGFLVFCE  60
   61 HNEVDFHYLI ANRQDMDNML TGLPTYLILV EMQIRCFQLA WHKDRFRALL QRFYAEIYVS 120
  121 EEMEPHLFAS IQRQMLATRV NSTVYLLALL NFFLVPVTNV IYHRREMLYK QVYPFDNTQL 180
  181 HFFIPLLVLN FWVGFIITSM LFGELNVMGE LMMHLNARYI QLGQDLRRSA QMLLKKSSSL 240
  241 NVAIAYRLNL THILRRNAAL RDFGQRVEKE FTLRIFVMFA FSAGLLCALF FKAFTNPWGN 300
  301 VAYIVWFLAK FMELLALGML GSILLKTTDE LGMMYYTADW EQVIHQSDNV GENVKLMKLV 360
  361 TLAIQLNSRP FFITGLNYFR VSLTAVLKII QGAFSYFTFL NSMR

Type	Start	End	Confidence
Cytoplasmic	1	141	0.79
Transmembrane Helix	142	162	0.91
Non-Cytoplasmic	163	181	0.88
Transmembrane Helix	182	203	0.93
Cytoplasmic	204	270	0.94
Transmembrane Helix	271	294	0.89
Non-Cytoplasmic	295	301	0.89
Transmembrane Helix	302	325	0.89
Cytoplasmic	326	377	0.93
Transmembrane Helix	378	399	0.64
Non-Cytoplasmic	400	404	0.64