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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|220947456
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFRLLGTAK TMAGMMRRNY TAGSLPGKGQ RTHMGATGAG VYILPTELSP LLRYVVKQIQ  60
   61 LLCKKPPKGF EKYFEAGGKS SGQPKGSVGD KKPPAGSSKS ASEKPSTSTP ASVKPSRSQT 120
  121 DAKSDWNFGM FSNSSRGPAG KGGNSLGGRP LGENGGGGDR ERWILLGAIG AVVLVGSFAF 180
  181 FEMGYKEISW KEFVNSYLSK GVVEKLEVVN KKWVRVRLQQ NSNSGSGVLW FNIGSVDSFE 240
  241 RNLEAAQTEQ GTESINFVPV IYRNEVEAAS LTGLLPTLLI IGFLVYMMRK SADMMGGGRG 300
  301 RKGGGLFGGV MQSTAKLTNP NEIGVGFKDV AGCEEAKIEI MEFVNFLKNP QQYIDLGAKI 360
  361 PKGAMLTGPP GTGKTLLAKA TAGEANVPFI TVSGSEFLEM FVGVGPSRVR DMFAMARKHA 420
  421 PCILFIDEID AVGRKRGGKT FGGHSEQENT LNQLLVEMDG FNTTTNVVVL AATNRVDILD 480
  481 KALMRPGRFD RQIYVPAPDI KGRASIFKVH LGNLKTSLDK NELSRKMAAL TPGFTGADIA 540
  541 NVCNEAALIA ARDSKDSIVL KHFEQAIERV IAGMEKKTNV LAPEEKRTVA HHEAGHAVAG 600
  601 WFLEHADPLL KVSIIPRGKG LGYAQYLPKD HYLLSKEQLF DRMCMTLGGR VAEELFFNRI 660
  661 TTGAQDDLKK ITDIAYSQVV RFGMNEKVGQ VSFDVGQAGD PVFSKPYSED TAQLIDNEVR 720
  721 SIIKCAHEAT TSLLTKHKEN VQKVAERLLQ NEVLSRDDMI ELLGPRPFKE KSTYEEFVEG 780
  781 TGSFEEDTTL PEGLKSWNKE KERTEPLDAG STPSSPPTKP VTAQSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle