YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG7724-PA
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNKSGEVLL VTGGSGFLGQ HLIKQLLERK EELGIKEIRS LDIVPYKNNI GHEETSLLRT  60
   61 YVADIGGDLK ALSPIFNGVD GVFHCAASVK IEYPPNYEEL ERVNVNGTLA VVDLCIQNNV 120
  121 KRLVYTSCTS VCFVPFKGRS TFSAVINSTE SKTDTPTLDS STLWEQDNQF LIPGYASSKL 180
  181 RAENIVLNSN GAPLHNQKEY LATSAMRAPL TYGECDSHFI TEIFDFLSTR GWVFPRIAGV 240
  241 GGKQQLVYAG NVAWGHICAY KALKVSDKAV NGLPVFVTDD TGINDVSRFV QKMAVLGERF 300
  301 KVKTSWWYVP HFLFFFLAFL LEVVVRVAYP YTKYRLRYSL RAIASYTSSM LMYNRLRASI 360
  361 HMDYMPLFDP DASAERSAKW YATWWDQRQQ AQKLKKSS

Type	Start	End	Confidence
Non-Cytoplasmic	1	306	0.76
Transmembrane Helix	307	329	0.84
Cytoplasmic	330	398	0.67