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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28574585, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRAHTAFSL ALSPMAHKNF ATWLLKSSSS QQMAKVTAAA AVRTYNSAAA EPFANGSTAS  60
   61 YVEEMYNAWL RDPTSVHTSW DAYFRSNSYP LNQIFTQFAG LEAADDGSGD VKYHLGTYIE 120
  121 RLNRVTNKNI RLAVVANPSH LEAVDPVVQG KTRAEQFYRG DQEGKKVMSI LIHGDAAFCG 180
  181 QGVVYETMHL SDLPDYTTHG TIHVVANNQI GFTTDPRFSR SSPYCTDVAR VVNAPIFHVN 240
  241 ADDPEAVMHV CKVAAEWRAT FHKDCVIDLV GYRRNGHNEI DEPMFTQPLM YQKIRKHKNC 300
  301 LDLYADKLIA EGTVTAEEVK SVAAKYENIC EEAFALAKTE THVKYKDWLD SPWSGFFEGK 360
  361 DPLKVAPTGV KEETLIHIGN RFSSPPPNAA EFVIHKGLLR VLAARKAMVD EKVADWALGE 420
  421 AMAFGSLLKE GIHVRLSGQD VERGTFSHRH HVLHHQLVDK ATYNSLQHMY PDQAPYSVSN 480
  481 SSLSEYAVLG FEHGYSMTNP NALVLWEAQF GDFSNTAQSI IDQFISSGQS KWVRQSGLVM 540
  541 LLPHGMEGMG PEHSSCRVER FLQMSSDDPD YFPPESDEFG VRQLHDINWI VANCSTPANY 600
  601 YHILRRQIAL PFRKPLILCT PKSLLRHPEA KSPFSEMSEG SEFQRIIPDN GPAGQNPSNV 660
  661 KKVVFCSGRV YYDLTKTRRE KQLEGEIAIV RVEQISPFPF DLVKEQANLY KNAELVWAQE 720
  721 EHKNQGSWTY VQPRFLTALN HSRDVSYVGR ACGASTATGS KAQHIRELNA LLNDAIST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle