YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Syx8-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVDHDSWD IEYEGCERLR HQLLVYLNQR QQLNPRTSQF VQLTSSIQTG IEQLAKDMKH  60
   61 LKVVLDNAIT WETSPEEELQ QRRIDWDRLT SQLREIREKF ANSSRSNVPA ASGSAWQDQD 120
  121 LGPGHSNSSR NTALDVEALK QKKTEMLAQQ NEGLEVLSAT LSRQRQLATQ LGNEVEDQNN 180
  181 ILDNLANAMD RVETGVQRET QSIGQVNRRD STWGYWLVII ALFVAIIVVV FV

Type	Start	End	Confidence
Cytoplasmic	1	211	0.71
Transmembrane Helix	212	231	0.96
Non-Cytoplasmic	232	232	0.71