YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220953830
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHCFTWTILG GLLALTSAAG LPQRPSSGYQ EQDTARAFYS YGYRDENAAR AEYSSRDGTS  60
   61 RGFYSYVDAD GKLQTVRYEA NGVQGFKAEA SNQPQAPVDK GKAPLPVTDT EEVQQARLNH 120
  121 LNALREAREK ALATSLREEA DRRQQEQIRN NNEDQQSGEQ SLTDEDAAIL ERVRAELSAM 180
  181 LADRQRELNL PRNRDDREQR EKQEIRQDQR KELRQDLRQE QRQDQREDRR QDQREDRRQN 240
  241 QREDRRQDQR EERREDQREE RGEDQREERR EDRREDRRED RRQDLRIDQE SRQDLLQDLR 300
  301 QDLRQDLRQE LRQDLRQDQS RNQESLRDSS QIRENARQIS SDRDGDDLRL RTVYSLADLS 360
  361 SSSYLKLGDL ASAEKLLEDR LDNSDLRVPI GAYYTLVSPN TKYSVTTPTE LRTLRPVALS 420
  421 RSLLVSKRN

Type	Start	End	Confidence
Signal Peptide	1	20	0.97
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	429	0.99