YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Mbs-PE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRSRSRTQ APLSSRRRSL SSSSRMAPSS GGSGAYNYNG SSYSSSGSTG RPLSTGYFPS  60
   61 SSSASSYQSP YASVYSSRES LYGGGGAGRS SYGSGGGGYD SSRYNPSSYS SAGSSYSTSD 120
  121 RYVSPYSSSY DKGVTTASLT FKSPGLSSSN SFKSSRLLKT KSLSASNSSL NGAYGGPSSN 180
  181 GVTSAGATVA AIAATRSNSL REQERKSRNR TRSKSAAQRS ISASSEKSEG YESGSERTSR 240
  241 SRLGSTASTA TTSESKSSSS NDKTENGDGI DYKALWEAEK LENDKLRQML KQKDDEAVQT 300
  301 RATLERFANA TTKNSLSELE KRERRAMERK LSELEEELKL LQKLKTENDR LRAENRALTR 360
  361 VVSKLTTSAQ SQLAKSK

Type	Start	End	Confidence
Signal Peptide	1	34	0.92
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	377	0.99