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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0305754, Hip...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQSACQAAT TGSCVPGTGQ QPDNERQSAL IAQQPPTAPV EPDYSGFDIV KATQYGAIAR  60
   61 VRELVESGWD VNQPDSETVT LLHWAAINNR RDIIRYFLEK GATVDAVGGE LNATPLHWAT 120
  121 RQGHLGAVVL LMAAGADPRI RDAEGCSCIH IAAQFAHTAL VAYFIAKGVD PDLQDRGGMT 180
  181 ALMWAAWKVC ALDPVRLLLT LGANPAMVDY THGNTALHWA ILARNATAIS TLVLKSKASL 240
  241 DVPNLRGETP LSMLESQTGA IWIGAKVMDR VKEAALTSQQ RRSLLSKLRH DKRLRWWSMV 300
  301 ACPFTAFYLA GIVFTVNTLY IIKFFLLGCL YSIFHTIGKA LFDEHLMALL PLSVYLATKA 360
  361 WFYVTWLMYI DDAVSFTATV CFLISSLLLW VCFLKSWKGD PGIIRPTREQ RFKTIIELSE 420
  421 RGGIGFEPAS FCSGCLVRRP IRSKHCSVCD RCVARFDHHC PWVGNCIGLK NHSYFMGFLW 480
  481 MLLIMCAWML YGGSKYYVNQ CNVRFDDFLG AMRAIGNCDA WVGWVMGNAL LHMSWVILLT 540
  541 ICQTYQVICL GMTTNERMNR GRYRHFQAKG GHSPFTRGPI QNLVDFLECS CFGLVQPKRV 600
  601 DWMNYYDYDA QTHQTIEKEP LLSVDCPDGM AGDHQYV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle