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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pgant8-PA
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLDIWRHKK KVLPLLLLMA IGSIIYYLYT LKLEGERDES ATSTTSRLER DIRDLQAVFE  60
   61 SEVIPDLGAL GRPARGNWTE EQLEAIAKSQ RETGYNAWLS KRISPERSLY DMRHRSCKKL 120
  121 KYPMEKLPSV SVVITYHNEE ASVLLRTLSS LRSRTPIQLL REVILVDDGS TQADEKLNDF 180
  181 IKIKFLNMVQ HRRITTQVGL MHARVVGAEL ALADVLVFLD SHVEVTKGWL EPLIAPILED 240
  241 NRTCTTPIID TIDFDNFAYR RGKPSRGFFN WEFNYIQLPL LKEEAVAMPA PHKNPIMNGG 300
  301 LFAIGREWFS ELGGYDKGLK IWGAEQFELS LKLWLCGGQI LEVPCSRVGH LFRDGNFQIR 360
  361 YTNKDKNSEK KLISRNYRRV AEIWLDEYKD KLFANMPHLT VIPVGNLAEQ RDLKNRLHCK 420
  421 PFKWFLDNLA TDFLNLYPIL DPAEYASGVL QSISSPKLCL DRKDPSHGQP KLAPCSSDHV 480
  481 FPSPEQYWSL TNHRELRSGF YCLEVRNHGV NVHIYQCHGQ SGNQFWSFDS KTHQVISGQQ 540
  541 QNFRHCLEAQ PELNAVTSSV CDPKNHKQQW KFGYLNSQRL QHFWDNVKTQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle