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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG16979-PA
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPKLKISAF LLKRLERTKQ QCSGCLFGVF YGEGTLLLLS FNIESSLGQL NYEQIQHRFP  60
   61 AELDLCGLVK FGGCTDGEAH LNEVIKSVDI TDNPILLQCE LGTLVGLRAS FFVHGKLEEV 120
  121 PYEVMEAHQL YNDFCFTRLQ CGFFLQTAAT PESVAREMHV LRKRVADGNL VFNVPQTKIF 180
  181 INNYGPLDKQ FSGDSQIQDL IDVIPTPGHE KETASVDKKK LKGQNTPVKR LAPTGCDYEV 240
  241 IPIDVMRSRS RDPVSGEPPH PALSIAVTNE EQIRVQVPLE IEAMAILCRK TKLQRLYDVL 300
  301 IESICRGLRL FELSLIEHLT ESGSGKLLVP ASYHFYPQEF GHFVSCAYLE GLSDDTPSML 360
  361 MRRKRLHRQF ALPISRPYFR RANQMLFLGE TEDAPWTPLL NTHIGLRPSG VVDGKEYLVN 420
  421 GNYHYYHYLQ QQVQDKGWGC AYRSLQTICS WFVLQGYTNA PIPTHLEVQE YLHKINDKPA 480
  481 AFVGSSQWIG STEISMCLQG FLNVDSKILH VASGAELATI ASELAMHFQT QGTPVMIGGG 540
  541 VLAHTIIGVD YCVQTGQVKF LILDPHYTGA DDLATIQIKG WCGWKGMDFW AKGSYYNLCM 600
  601 PQRPILY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle