YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7294288, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.34
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHSDSDEEW EPGNEDKPAS DVTIYNYYNM GPAFGKKFPL PYIRLMIAQV VKEKLANKTY  60
   61 NQSEALKWTR EVADDINIKM KGRGSSPRFK HVVNVMLYQQ TGAGCFYGAR AIWDELSDDY 120
  121 ITFTFDGGSF ICIAAVFGCY QY

Type	Start	End	Confidence
Cytoplasmic	1	91	0.57
Transmembrane Helix	92	111	0.37
Non-Cytoplasmic	112	119	0.75
Transmembrane Helix	120	140	0.55
Cytoplasmic	141	142	0.34