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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Tollo-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.85
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLATTHMLYV LIATCVIPIF GAALSKTVLY QAPDECRWSG GGEHDITLVC HLRTINSELE  60
   61 NTNFSVIQPQ NTVRLRLECN DALFFQSSLS PDSFRSLVEL RDLTIEYCKL GNLTDGSFRG 120
  121 LQELRNLTIR THNGDWSTMS LEMASNSFVE FRQLERLDLS LNNIWLIPDG MVCPLKSLQH 180
  181 LNASYNKIQD ISNFYFSASL SSRKARVCGS TLQSLDLSAN KMVSLPTAML SALGRLTHLN 240
  241 MAKNSMSFLA DRAFEGLLSL RVVDLSANRL TSLPPELFAE TKQLQEIYLR NNSINVLAPG 300
  301 IFGELAELLV LDLASNELNS QWINAATFVG LKRLMMLDLS ANKISRLEAH IFRPLASLQI 360
  361 LKLEDNYIDQ LPGGIFADLT NLHTLILSRN RISVIEQRTL QGLKNLLVLS LDFNRISRMD 420
  421 QRSLVNCSQL QDLHLNDNKL QAVPEALAHV QLLKTLDVGE NMISQIENTS ITQLESLYGL 480
  481 RMTENSLTHI RRGVFDRMSS LQILNLSQNK LKSIEAGSLQ RNSQLQAIRL DGNQLKSIAG 540
  541 LFTELPNLVW LNISGNRLEK FDYSHIPIGL QWLDVRANRI TQLGNYFEIE SELSLSTFDA 600
  601 SYNLLTEITA SSIPNSVEVL YLNDNQISKI QPYTFFKKPN LTRVDLVRNR LTTLEPNALR 660
  661 LSPIAEDREI PEFYIGHNAY ECDCNLDWLQ KVNRESRTQP QLMDLDQIHC RLAYARGSSH 720
  721 VSLIEAKSDD FLCKYASHCF ALCHCCDFQA CDCKMECPDR CSCYHDQSWT SNVVDCSRAS 780
  781 YEQTLPSHIP MDSTQLYLDG NNFRELQSHA FIGRKRLKVL HLNHSRIEVL HNRTFYGLLE 840
  841 LEVLQLQSNQ LKALNGNEFQ GLDNLQELYL QHNAIATIDT LTFTHLYHLK ILRLDHNAIT 900
  901 SFAVWNFLPS YLNELRLASN PWTCSCEFID KLRDYINRHE YVVDKLKMKC DVISGNSTQQ 960
  961 MVIYPGSGEP ASLPVVQCSQ TLPLGLDNNF NYAEQAGGEN ASNATSTKMI LNQPPKLDYI1020
 1021 PILVAILTAF IFVMICISLV FIFRQEMRVW CHSRFGVRLF YNAQKDVDKN EREKLFDAFV1080
 1081 SYSSKDELFV NEELAPMLEM GEHRYKLCLH QRDFPVGGYL PETIVQAIDS SRRTIMVVSE1140
 1141 NFIKSEWCRF EFKSAHQSVL RDRRRRLIVI VLGEVPQKEL DPDLRLYLKT NTYLQWGDKL1200
 1201 FWQKLRFALP DVSSSQRSNV AGQSCHVPIN HASYHHHHHV HQQAMPLPHS VHHHQQQFML1260
 1261 PPPPQQPGSF RRQPSLHQQQ QQQQQIRGNN NTTQQQQQQQ AALLMGGGSV GGPAPQMIPL1320
 1321 AGGIQQQSLP LPPNQQPTPA SRNLHM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle