YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0304214, CG6...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRLQDFLS RHRRKFIVTG VLVGGTIFAA RYAQRRFVEF QEKQAREFFE RTRRTTHFES  60
   61 TEKTCNQVIL GMGEEMCQAV LRECSTDELL EQLRQNPKNK LELWEDMKIV AFTRLATYVY 120
  121 ASSMLVIALR VQLNLLGGYI YRDIMTEQKQ VTDELKQQYL SLIRHFITDS GIRDLARYIR 180
  181 TQVIAVTKTI PLSEQLSLSD LEQLFWSLQM AINADTRRDP NSRMSKYLLP SQNPSHSPLL 240
  241 QKMVNETLDL LESEDAVGVC SHNVSRGFVL ACDAIAESMG ETLQHLPQAK VQTQQEQSVK 300
  301 FNQAGSLGAS TSKSQNGLEN NNLLNINRVL LALAKLIPII SGLTSRGFDT TSRPHNLPTQ 360
  361 LLTFYVVAEK TKTLGANVYE SFSSA

Type	Start	End	Confidence
Signal Peptide	1	29	0.54
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	385	0.98