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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|220945316, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMERLSTHLS LTGLSLAHPL QTHLGSGGGT HHLGQLAAAV HQQQQQQQQS DQGLGHSHHL  60
   61 HGQQLSLNHQ HHHPHQSPQH QQQHQHHPCS SNSSNGSPNG STGLGLHPHS ALHLAHHHSQ 120
  121 LHQHHPAGQQ QQHSQPPVSS SSTSHHSQSQ ALSHQTHSNG SSQLGGGSAS GAGSVAGGAA 180
  181 NSHHSAPASS SVMAAAAAAH LHHNSQASPI SNLHQNMGSL MNSGSSASDV FFSLMIQNTT 240
  241 KRQNEEHIKR PMNAFMVWSR LQRRKIAQDN PKMHNSEISK RLGAEWKLLT EEEKRPFIDE 300
  301 AKRLRAMHMK EHPDYKYRPR RKPKALRRDG YPYPMPYPSV PVEALRAGIT PGYFAPGPTA 360
  361 AAYHLGSHLG QTSTPTTTQA TLSGQMDKFA LERSSYLSNS SQASAYSAYL DPSVLTKAYF 420
  421 DSKMYQDRAA NYAFDISKIY GAQQHAAAHH QQQQQQQQQQ QQQQQQLLLS GGGGSGGGGS 480
  481 ASSHNNNSSS GLDDRDATPQ LEAVESKPHL HSPSDVGLDY AQYAQQYGGQ LAAAAGGAVG 540
  541 GGAAGAAGGS AGGGSGGATA ADFRRPLTVI F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle