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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Hml-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANKVIFVAL WLLFISSVLT ENGDIIITDD DDEDINPLLQ AAPEVVDKEN ERNERHISFN  60
   61 ILKAPAVSAR YTYGGSEGGR SGFGGGYGVG GGGGGGYGGI KTSHAAGGLL TKTLGFLGMG 120
  121 GQGSQGNFYG GGGHFLAAFG KCSALQLPSN VQSECHNGRC KVFCPTGYSF AQDVSVLEMF 180
  181 CSNDGWIIGN SVFAEVPPCQ AQCTPPCQNN GICISAGVCQ CPENYYGPLC QQKKSICASF 240
  241 PKAPKNSKVS CKNNMCHAEC MRGFQFPDGS GITNIECRNG QWVHTKTGLS KTPDCAPTCA 300
  301 PACQNGGQCI SFNVCQCSKM FRGDHCQYNI DRCNVTNTNF NGNYKCAYEM DDARCTFSCP 360
  361 QVPGLKIQGR IDIEYKCNYL QGQYLPAPLP KCIFPPGYTV RSTSSMQGVT HQNGVYHRGM 420
  421 SGEMAYELQT ERQKLLALLA KYRDLERRSE WWSSEETVVT MSSYSLYQSN NLDIVIDKTP 480
  481 RPALCTTWGG INMKTFDGLV FKAPLSCSHT LITDKVSGTF DIILKACPYG SGYGCAHTLK 540
  541 ILWQSVLYTF ENLNGTMQLT TPIKKLPMPV QVMGMKVMPV AQHVQIDLES VGLKLDWDHR 600
  601 QYVSVQAGPQ MWGKVGGLCG TLDGDPNTDL TSRTGKKLAT VKAFADAWRV EDRSELCQVE 660
  661 NSAEMEFGMD SCEQSKLQKA VSVCERLLAN EKLGDCIKPF NYDALIRTCM ADYCNCANRE 720
  721 HPESCNCDAI AMLAKECAFK GIKLEHGWRN LEICPISCGF GRVYQACGPN VEPTCDSDLA 780
  781 LPASKGACNE GCFCPEGTVQ YKEACITREL CPCSLRGKEF KPESTVKKNC NTCTCKNGQW 840
  841 RCTEDKCGAR CGAVGDPHYQ TFDGKRYDFM GKCSYHLLKT QNTSVEAENV ACSGAVSESM 900
  901 NFAAPDDPSC TKAVTIRFIL RDGTPSVIKL DQGLTTIVND KPIAKLPKML GLGEVLIRRA 960
  961 SSTFLTVEFA DGIRVWWDGV SRVYIDAPPS LRGQTQGLCG TFNSNTQDDF LTPEGDVETA1020
 1021 VEPFADKWRT KDTCQFKAET HQGPHPCTLN PEKKAQAEKF CDWILQDIFQ DCHFLVEPEQ1080
 1081 FYEDCLYDTC ACKDEMSKCF CPILSAYGTE CMRQGVKTGW RMSVKECAVK CPLGQVFDEC1140
 1141 GDGCALSCDD LPSKGSCKRE CVEGCRCPHG EYVNEDGECV PKKMCHCNFD GMSFRPGYKE1200
 1201 VRPGEKFLDL CTCTDGVWDC QDAEPGDKDK YPPSSELRSK CAKQPYAEFT KCAPKEPKTC1260
 1261 KNMDKYVADS SDCLPGCVCM EGYVYDTSRL ACVLPANCSC HHAGKSYDDG EKIKEDCNLC1320
 1321 ECRAGNWKCS KNGCESTCSV WGDSHFTTFD GHDFDFQGAC DYVLAKGVFD NGDGFSITIQ1380
 1381 NVLCGTMGVT CSKSLEIALT GHAEESLLLS ADSAYSTDPN KTPIKKLRDS VNSKGHNAFH1440
 1441 IYKAGVFVVV EVIPLKLQVK WDEGTRVYVK LGNEWRQKVS GLCGNYNGNS LDDMQTPSMG1500
 1501 LETSPMLFGH AWKLQPHCSA PVAPIDACKK HPERETWAQL KCGALKSDLF KECHAEVPLE1560
 1561 RFWKRCIFDT CACDQGGDCE CLCTAVAAYA DACAQKGINI RWRSQHFCPM QCDPHCSDYK1620
 1621 ACTPACAVET CDNFLDQGIA ERMCNRENCL EGCHIKPCED GFIYLNDTYR DCVPKAECKP1680
 1681 VCMVRDGKTF YEGDITFTDS CATCRCSKRK EICSGVKCDV PATTGLPAPL VEGTTLPTPL1740
 1741 ATQNQTKCVK GWTRWCDKDR DTSDKSVRLN DEEKVPRYDR MENVYGTCLK QYMTKVECRV1800
 1801 KDTHEAPEQM DENVVCSLEE GLRCIGKCHD YELRAFCQCD EELEPELPKP TEKPQLGLAC1860
 1861 DAAVVEYKEF PGDCHKFLHC QPKGVEGGWI YVEKTCGEYM MFNPTMLICD HIATVTEIKP1920
 1921 NCGLKPEPEP EFEPIKQCPP GKIKSECANQ CENTCHYYGS ILKKRGLCQV GEHCKPGCVD1980
 1981 ELRPDCPKLG KFWRDEDTCV HADECPCMDK AEHYVQPHKP VLGEFEVCQC IDNAFTCVPN2040
 2041 KPEPVPKDED DDLDLVSVVP IYPVTLTPPL QCSPERLIPK IENPAHSLPD SIFNASSQLA2100
 2101 PEHGPKMARL TKEQPRGSWS PSINDQMQYL ELNFAKPEPF YGVVMAGSPE FDNYVTLFKI2160
 2161 LHSHDGIAYH YLVDETEKPQ MFNGPLDSRA PVQTLFKIPI EASSLRIYPL KWHGSIAMRV2220
 2221 ELLICGDKEE PKPVPTVSTI LPITERPARL VDLECIDLMG VDEGKMYQDQ VQSSSLWQQP2280
 2281 NLGKKLQLLE LLKLSTPLAW RPLANSQNEF IEFDFLEPRN ISGFVTKGGP DGWVTGYKVM2340
 2341 FSKKKPTWNT VLSTDGQARI FEANHDAETE RRHHFKNPIL TQYIKIVPAY WEKNINMRIE2400
 2401 PLGCFLPYPE IQRQVPVEES KPTKCNICDG VSTSSSTTGC QCQDQLFWDG NTCVQHNLCP2460
 2461 CIENYVSYPI GSKFENSACE DCVCVLGGHK NCKPKKCPPC LGGKLRPVIT SDCFCKCEPC2520
 2521 PKHQRLCPSS GDCIPEILWC NGVQDCADDE DASCSDSFTV EPDVSREKNE TEVITCPVPV2580
 2581 CPPQMKIRIT EKKSRKMSKM FTFSKQVSIV DDGTTITKTK FISSKEQILA MPNRELDFQL2640
 2641 EEQCDEFTCV PIPSKQVDKN ETVTCTEPKC PEKYDVELDM SASKVGDCLR YSCVLRPNKD2700
 2701 DVCEISGKSF TTFDGTVFKY GPCSHILARD IHSSSWSISV HQQCSDETRK VCHKVITIQD2760
 2761 TEAGNELILL PHLKLKFNGY EFTVQQLINS PICKASFVVS QPGKTLLAVS TKYGFWVQLD2820
 2821 DIGIVKVGIS SKFIRTVDGL CGYYNGNQKD DKRSPDGQII PNTEKFGDSW YDKRIPKDQC2880
 2881 GDLKCPREMQ AKALQLCNII HHPTFARCHK AVNYKQFLNN YCLEAACNCM MANNGDPAAC2940
 2941 KCNILESFVK KCLSVNPLVQ LTTWRAVAQC EINCPSPLVH TDCYKRRCEP SCDNVHGDDC3000
 3001 PVLPDACFPG CYCPEGTVRK GPNCVPISEC KDCVCNSLGA SKYMTYDRKS FSFNGNCTYL3060
 3061 LSRDVVLPGV HTFQVYVSMD DCKKLGQPTP VEGGSCAKSL HILNGDHVIH VQRVPQKPKS3120
 3121 LQVLVDGFEV KKIPYKDSWI SLRQVVGKEL VLSLPESHVE LTASFEDLIF SLGVPSIKYG3180
 3181 SKMEGLCGDC NGNAGNDLQP NPAKKKAGVD VIQSWQADEP KLGLVEECLS EDVPKEHCIP3240
 3241 LPPEKDPCLQ FYNAELFGKC PLAVDPIAYV SACQQDICKP GNTQQGVCVA LAAYAKECNQ3300
 3301 HGICTNWRRP QLCPYECPSD MVYEPCGCAK NCDTIKALSE FDAVSLKNEA VVHTVKTDEM3360
 3361 CLSSERFEGC FCPPGKVMDG GQCVPEIACT KCDDGLHLPD EKWKKDKCTE CQCDSKGKTT3420
 3421 CVEKKCQVEE NICAEGYRPE TIVSVDECCP RYRCVPETKD PSKLCLAPLV PICGPGQFKK3480
 3481 EKKDVNGCSQ YICECIPKDQ CEIIELRELL PGEIIVNVEE GCCPTQKIEC KPETCPKAPV3540
 3541 NCQERFYEVK TIKEPGMCCS KHSCVPPKDL CIVQYELDEA TKFTKTVGDK WTHAKEVCKQ3600
 3601 ETCSYGPDGN AQVVSTLEQC LTDCAPGFSY QNLDKTKCCG KCVQTSCIFE QKLYEVNALW3660
 3661 KSADNCTTYS CLKKDGQFLV TTSREVCPDV GSCLSHLLYQ DGCCKRCKSE PLVEDKSSCL3720
 3721 PVSLAESRTK EILKFPVQGH GTCVNADPIQ GFTDCEGACS SGSKYNTLTD MHEKFCTCCS3780
 3781 IKSYHPISVK MICDDGHTFT QKHEVPSNCG CSPCSEFSDS AIDVRMQQDA QSPLLQLLGN3840
 3841 HRH

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