YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG8757-PA
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASHSVFRRL WNGNMERWCN KVAVVSGASA GIGAACTRAL IGAGMIVVGL ARRHERVEKL  60
   61 RSGLSLEQQS RLHAIKCDIT QEDQVLKAFD WTCRQLGGVD VLVSNAGIIG TGELSERDDG 120
  121 PAMRSTIETN IMGTVYCVRE SFRSMKRRGT EGHVVIVNSV AGYQVPNLGP QLPSLNIYPA 180
  181 TKFALRAMNE IYRQEFQRHK TAVRVSTVSP GIVDTVILPE QIQGIIKQHM PMLRSDDVAD 240
  241 AVLWAIGTPP NVQVHNITIK PQGEKF

Type	Start	End	Confidence
Cytoplasmic	1	20	0.41
Transmembrane Helix	21	46	0.58
Non-Cytoplasmic	47	266	0.74