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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24663839, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFAHPCPAPA GNYHSGLLHP LLLLLFLLAF SNFRPTHGEV FTLGYLTASQ RRPGNLDYNR  60
   61 PGLTISGAIS LAVEEVNAGR LRDRGHSLQF VVAETYGEEV VSIRQTAALW TQQVAAYIGP 120
  121 QETCVHEGRM AAAFNLPMIS YYCTHRDPSN KADFPTFART RPPDTQISKS VVALLLAFNW 180
  181 TQVSFLYLDD ASGQYQPVAE TILSTLTDAG VSIRDIRTWN TIYHHGFMDN PFEALVEQTY 240
  241 ANTRIYLILG HYYEHVGLMV SLQRRGILSK GDYFVVGIDI EQYDPAKPEK YLRGLLLEDV 300
  301 EPLAVQAFQS YLGIVPTASV SFATFANEVC PLTGPDSDVI DALHPPSARL IIVNKYMERP 360
  361 PFNFPNPLGP FGGVKQISAE AAYLYDAVHL YAKALMEVLD SGGRPRNGSA IVAAIKGSRY 420
  421 RSAMGYHVYI DENGDAAGNY TVLARGSVRN GRNQTVLGLR PVGTFIHRNS SLSSISKALP 480
  481 NLKLFSPIDW VGGTRPAAAP RCGFGGEKCV NYTGEISAAI AGGALLLLSL VSLVLYRNWR 540
  541 YEQELDSLLW KIDFREVQIH ENEREQQSQK QTRHLLNHLP RRLPPQSTHP LIRTSQVSLS 600
  601 SNPDADFRYT TIFTPIGLYK GQLYAIKKVR KKSVDITREM KKELKLLRDA RHDNICAFIG 660
  661 ACTDPPNICI ISEYCTRGSL KDILENEDVK LDNMFIASMV ADIIRGVIYL HDSPIRFHGA 720
  721 LCTSNCLVDS RWVVKLTDFG LFAFKQGIED SSTDMQHMSA KCLKLLYRAP ELLRQGPSSL 780
  781 VMGTQRGDAY SFGILLYEMH VRRGPFGETG LTPMQCLQKV LQPQDYLNPY RPSLQPLETA 840
  841 FDCVSECLRE CWAERPEDRP DFKTIRTKLR PLRKGMRPNI FDNMMAMMEK YANNLEALVD 900
  901 DRTDQLQEEK KKTDALLHEM LPRCVADQLK KGHKVDPEHY EQVSIYFSDI VGFTAMSAEC 960
  961 TPLQVVDFLN DLYTCFDSII GHYDVYKVET IGDAYMVVSG LPLRNGDLHA AEIATMSLHL1020
 1021 LSAVSEFKIR HRPTNRLLLR IGIHSGPVCA GVVGLKMPRY CLFGDTVNTA SRMESSGVPL1080
 1081 KIHCSWQCRQ LLDRLGGYHF AERGVISMKG KGDQRTYWLL GEDEEARTRR TYERSQRRGS1140
 1141 RALNKFIQGT IKQAQEQANE YGIRSSLKQK NLPRNSLTRS SSLESPKKLR FAAGSLLEHH1200
 1201 RYHSDEALLE VDSYTGLRRS SGGSTQSRYE ETTLSLTLSC QSIEIVGGQH NKRRPSSYPT1260
 1261 ANTPLLMNHV EV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle