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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7294467, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFAHPCPAPA GNYHSGLLHP LLLLLFLLAF SNFRPTHGEV FTLGYLTASQ RRPGNLDYNR  60
   61 PGLTISGAIS LAVEEVNAGR LRDRGHSLQF VVAETYGEEV VSIRQTAALW TQQVAAYIGP 120
  121 QETCVHEGRM AAAFNLPMIS YYCTHRDPSN KADFPTFART RPPDTQISKS VVALLLAFNW 180
  181 TQVSFLYLDD ASGQYQPVAE TILSTLTDAG VSIRDIRTWN TIYHHGFMDN PFEALVEQTY 240
  241 ANTRIYLILG HYYEHVGLMV SLQRRGILSK GDYFVVGIDI EQYDPAKPEK YLRGLLLEDV 300
  301 EPLAVQAFQS YLGIVPTASV SFATFANEVN KYMERPPFNF PNPLGPFGGV KQISAEAAYL 360
  361 YDAVHLYAKA LMEVLDSGGR PRNGSAIVAA IKGSRYRSAM GYHVYIDENG DAAGNYTVLA 420
  421 RGSVRNGRNQ TVLGLRPVGT FIHRNSSLSS ISKALPNLKL FSPIDWVGGT RPAAAPRCGF 480
  481 GGEKCVNYTG EISAAIAGGA LLLLSLVSLV LYRNWRYEQE LDSLLWKIDF REVQIHENER 540
  541 EQQSQKQTRS THPLIRTSQV SLSSNPDADF RYTTIFTPIG LYKGQLYAIK KVRKKSVDIT 600
  601 REMKKELKLL RDARHDNICA FIGACTDPPN ICIISEYCTR GSLKDILENE DVKLDNMFIA 660
  661 SMVADIIRGV IYLHDSPIRF HGALCTSNCL VDSRWVVKLT DFGLFAFKQG IEDSSTDMQH 720
  721 MSAKCLKLLY RAPELLRQGP SSLVMGTQRG DAYSFGILLY EMHVRRGPFG ETGLTPMQCL 780
  781 QKVLQPQDYL NPYRPSLQPL ETAFDCVSEC LRECWAERPE DRPDFKTIRT KLRPLRKGMR 840
  841 PNIFDNMMAM MEKYANNLEA LVDDRTDQLQ EEKKKTDALL HEMLPRCVAD QLKKGHKVDP 900
  901 EHYEQVSIYF SDIVGFTAMS AECTPLQVVD FLNDLYTCFD SIIGHYDVYK VETIGDAYMV 960
  961 VSGLPLRNGD LHAAEIATMS LHLLSAVSEF KIRHRPTNRL LLRIGIHSGP VCAGVVGLKM1020
 1021 PRYCLFGDTV NTASRMESSG VPLKIHCSWQ CRQLLDRLGG YHFAERGVIS MKGKGDQRTY1080
 1081 WLLGEDEEAR TRRTYERSQR RGSRALNKFI QGTIKQAQEQ ANEYGIRSSL KQKNLPRNSL1140
 1141 TRSSSLESPK KLRFAAGSLL EHHRYHRFDN IY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle