YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ste14-PA, FBpp03...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCAKSRVASP GAGGTSLCSE GRISLYCFLI TAALVLIPSV PQNLYGVVPQ VWGAVLWGPF  60
   61 LYYALINMII RFVLRNHDYQ VAIRASFLGF AMAVSVLVIC FAPTEWQQFG AYGCFMSLFH 120
  121 YSEFLVIAFA NPRTLSLDSF MLNHSVHYGL AAAASWIEFS LEVYYLPQFK RYGYIWVAGV 180
  181 VLCLLGEMVR KAAIITAGRS FTHLVQNEKH SEHKLITSGI YAYCRHPSYV GWFWWSIGTQ 240
  241 IVLLNPICIC IYTLVSWLFF HDRIYVEEYS LLNFFQSDYV RYQKRVPTGL PFIRGYLVD

Type	Start	End	Confidence
Cytoplasmic	1	20	0.95
Transmembrane Helix	21	41	0.89
Non-Cytoplasmic	42	52	0.72
Transmembrane Helix	53	74	0.87
Cytoplasmic	75	80	0.95
Transmembrane Helix	81	102	0.90
Non-Cytoplasmic	103	108	0.73
Transmembrane Helix	109	130	0.65
Cytoplasmic	131	143	0.54
Transmembrane Helix	144	166	0.73
Non-Cytoplasmic	167	171	0.58
Transmembrane Helix	172	194	0.81
Cytoplasmic	195	231	0.50
Transmembrane Helix	232	261	0.73
Non-Cytoplasmic	262	299	0.43