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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: prc-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPFRLGLLL GAVLFVASAN GAAIENEVSS LNDLQREKRS GRGYSRGQTQ SQYLNFGKPE  60
   61 EDGKAEAEAT ENGSRSTVSG THGMGQAQSQ FSSGDCNGCS GYQTDYPSSG RILDASGSGG 120
  121 IGRPDSIISL PGGVGGQTGA GQAGYGSQLG VGAQAGAGQP GYGDQPGVGT QPGVGQPGYG 180
  181 SQPGIGGQTG AGQPGYGSQP GIGGQTGAGQ PGYGSQPVVG AQTGTGQPGY GAQPGVGTQT 240
  241 GAGQPGYGSQ PGIGGQTGAR QPGYVTQPGV GAQTGIGQPG YGAQPGILGQ TGAGQPGYGS 300
  301 QPGIGGQTGA GQPGYGTQPG VGAQTGTGQP GYGAQPGVGT QTGAGQPGYG SQPGIGGQTG 360
  361 AGQPGYGTQP GVGAQTGAGQ PGYGAQPGVG AQTGAGQPGY GSQPGIGGQT GAGQPGYGSQ 420
  421 PGIGGQTGAR QPGYGSQPGV GAQTGAGQPG YGAQPGVGAQ TGAGQPGYGS QPGIGGQTGA 480
  481 GQPGYGSQPG VGAQTGAGQP GYGAQPGVGA QTGAGQPGYG SQPGIGGQTG AGQPGYGTQP 540
  541 GVGAQTGTGQ PGYGAQPGVG TQTGAGQPGY GSQPGIGGQT GAGQPGYGTQ PGVGAQTGTG 600
  601 QPGYGAQPGV GTQTGAGQPG YGSQPGYGTQ PGVGAQTGTG QPGYGAQPGV GGQTGAGQPG 660
  661 YGTQPGIGGQ TGAGQPGYGS QPGIGGQTGG GQPGYGSQIG GQTGAGQPSY GSQPGVGAQN 720
  721 GAGQPGYGTQ PVIGGQTGAG QPGYGGQTGV GGSPGFLTQP GIGGISGPIG GKLGGGQSEA 780
  781 AKPGYWAQPG IGGPSRYGSQ PGIGDQTGTG QSGYGGQPGI SGQTGGGQPG YGGQATISGL 840
  841 PGYGTQPGIG ALTAVPGGHY GYETQPGIGG QTGTNQPGFG GQPGIGGQTG AGQPGYGFIG 900
  901 QPGIGGQTGT SGRQPGYGTQ PGIGGQTAAG QPGYGSQTGV GGQIGAGQPG YGSQPGIGGQ 960
  961 TGAGQPGYGA QPGFGGQPGY GNQPGVGGQT GAGQPGYGSQ PGIGGQTGAG QPGYGAQPGF1020
 1021 GGQLGYGNQP GVGGQTGAGQ PGYGSQPGVG GQTGAGQPGY GVIPGFGGQP GIGGQTAAGK1080
 1081 PGYGGQPGIG GSPVYGTQQG TGGQSGISGG QPGYGTQPGQ TGAGQPGYGS LPGTGGQATA1140
 1141 GQPGYGPGSQ PGIGGQTVGG HGGYGSQPGI GGAPVYGTQP GGGGQTGVIG GQPGQIGDRV1200
 1201 GQPGYGTQTG QIGAPGRYTD GSQTVPGAVG TGGVVAAGTS GADDAFSQAE SSIGDGQASA1260
 1261 SAQGKKNGGT AKTQVSGTYS SGGTFSASAM TSDADRAASA QVTGNADGAV SQSQGSGGPA1320
 1321 QSQAQVQVAK DGGTKASSQS GGIIQQSQSE VHANDKGGLA DAQSSGPGQT SSQAQIGFRP1380
 1381 GQEANPIAAN GGGQASSSSG THSSQSSSQI HGTSSFGVSY HGAAQSASGT KEQVATYREA1440
 1441 NRELFNTISQ FGNNANAVTD RADAVYSGPA LTDESDRVPE AQLKSTKPKE EAEQVVSKLD1500
 1501 HPEPVQYDDE DEADPDEYDE DEYYEEKPVK LEESPKSSTI VAPTEATPRP KTYNQSSPTQ1560
 1561 SQQTVVVPVP GEKYQVVQKQ NGKATINAEP STTEAIPPGF RGTVNVEKKF HTKALELHAP1620
 1621 KGVEITPDTS DEGPVRGDKP LRRAPDSYVT VTKSVTGSMD NTKNPPQENK NFQSTYYTKS1680
 1681 STCGYFTFSC NIVYGANGRS KICRPKAPTN GKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle