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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: rt-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATYTNTIT QRRKTAKVRQ QQQHQWTGSD LSGESNERLH FRSRSTNSMQ QHTAISNSPS  60
   61 PLCCNGARAL TMLNCCVDVN CHLNAPLRGS VNRHTTPTPT PTATPTPVAT PKQASPSPTS 120
  121 DRSRSLSRSP SPSRSRSLSC QKQIDKNSAG AASAEERKTA NASSQPFTVN LRIDLFSWTL 180
  181 FLLAFGTRFY KLATPPHIVF DELHYGKYIS MYMRNIFFFD QHPPLGKQLI AGLVSLAGYD 240
  241 GNYTFTRIGE PYSPEMPIFW FRFLPAMCGS LLAPAVYNLL LEAKLSRWSS ALGGLLVVLD 300
  301 NSLLTQSRFV LMESMLLLAT TVGIACLLRF QRSRLGSLEW FFTGTAAAVC LGAAGTVKYV 360
  361 GFLALGLAFY LLCRHLWQLL YDAGLTDRQL WMHAISRLLI FVGIPLAVYL GVFYIHFKTL 420
  421 HRAGPHDSIM TSAFQASLDG GLASITKGQP LAVVHGSQIT LRHTHGRTCW LHSHAAVYPV 480
  481 RYPDKRGSSH QQQVTCYSFK DVNNWWLVKR PTKENLVVGD EPDIIRHGEI IQLVHGITSR 540
  541 ALNSHDVAAA MTPQCQEVSC YIDYEIKMAG ELLWRVEILN RDSEGDIWHA IKSEVRLVHV 600
  601 STEASLKFSG RQLPEWGFNQ HEVVADREKA IHEDAIWNVE EHRYTQTEDH RERERQMLTA 660
  661 EMIPTKRTRI SFWAKLLELQ SKMLFQTKSV PNHMYSSMPH EWPLMDKGIA YWLDSQSSAQ 720
  721 IYLLGNILLW YTATMGILVY AGLLAFYAMR RQRLCFDISE QEWQRFVLAG DTFFMGYVMH 780
  781 YIPYFCVDRT LFLHNYLPAF VFKLLLLCFV VEHLDYLLRR FCTGRGVHLV RLYRLMLILW 840
  841 LVGVLSIFSK FIPFSYGARK MTLNEVRSLR WKDTWDFVLH KNHHLY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle