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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG8177-PH, CG817...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFSSASGRE NNVRKLSFLG FNTKKKSGNE DPDEVLLDSE MDKVFAGNSA RKDKFDVNTF  60
   61 QDNSQLPIGS RKKNSIRTND LNIEEDSEYE SQTEPLNNAQ NYDDIPEDFP LVSERAGHGD 120
  121 HSDNSVDEKH VQFGGKKKIP PSLSYDEQPT DQSHERKRRR SRHQYYRQRK FSHQDSVEPK 180
  181 NKLEENGDAG ARRISVQPED TALEEADLNE LRSHRSDDPR ALRRHKIHHS SIKLRELPQI 240
  241 TISPFTNKKP EVDHSPHEIF VQLDELTGVG EDREWKETAR WIKYEEDVEE GSDRWGKPHV 300
  301 ASLSFHSLLN LRRCLETGVV LLDLNEKDLP AVAYRVVEQM VIEDLIDIND KPSVMRSLLL 360
  361 RHRHVNEHQG VLPFTKRKYN SYTSLQNLSG TDDKKIKIMP AAEIGGSKRS NELKIDMKDD 420
  421 MYSSSQEDLK KLQNDTILKR IPAGAEATTV LVGAVEFLEQ PTIAFVRLSE GVLMPTLTEV 480
  481 PVPVRFMFVL LGPRNFDLDY HEVGRSISTL MANEHFHSIA YKADDRKDLL SAINEFLDDS 540
  541 IVLPPGNWDR HDLLPFEELK AKKDWIRTRK IKALQVKRDS EMIKIGKDEE KALLEKQTLG 600
  601 AIGFTIGGGD GGGDGDSDDD NGRKKKKPSP LEKTGRLWGG LRNDLKRRMP MYKSDILDGL 660
  661 NTETLAATIF MYFACLSTAI TFGGLVSAKT NSWIGISETL ISCSLVGIVF HCLSCQPLVI 720
  721 IGTTGPLLLF DEALMVFCTQ HEFDFLSLRV YVGVWLIIIA LTVSAFEGSV YVRLLTRFTQ 780
  781 EIFSALITLI YIVETFMKLI SIYRENPLLS DYNLPPPTLV AHEHATNESL LNATASVTTN 840
  841 ITQMVMNIST TAMPIGPPPL PKNQPNTALF CTILTLATFV VAYYLKLFRN SHFLGRNARR 900
  901 ALGDFGVPIS IAIFVLVDYL VPAVYTEKLV VPEGLSPSDP SKRGWYIGFD TSSTWIPFAC 960
  961 VIPALLVYIL IFMESQISEL IVDKPDRGLK KGSGLHWDIV LLCLLNCACG IFGMPWHCAA1020
 1021 TVRSVTHVSS VTIMSRTHAP GESPRIVDVK EQRLSGFFVC LMIGLSVLMA PLLRLIPMAV1080
 1081 LFGVFLYMGV ASMSGVQLFE RIRLYFMPVK HYPPTSYVKR LRPWKLHLFT TIQVLCLVLL1140
 1141 WSVKSSQFSL AFPFFLIMMV PIRQNLTKLY KPEEMQALDG SEMKKNDDDE PDFYEQTNIP1200
 1201 A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle