YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Or67b-PB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDQLDHELE RIDKLPKLGL LWVEYSAYAL GVNIAPRKRS SKYCRLTRIL VLIVNLSIIY  60
   61 SLVAFIMENY MISFETYVEA VLLTFQLSVG VVKMFHFQNK VESCSQLVFS TETGEVLKSL 120
  121 GLFQLDLPRK KELLSSVSLI LLNNWMIIDR QVMFFFKIVC MPVLYYCVRP YFQYIFDCYI 180
  181 KDKDTCEMTL TYPAIVPYLQ LGNYEFPSYV IRFFLLQSGP LWCFFAVFGF NSLFVVLTRY 240
  241 ESGLIKVLRF LVQNSTSDIL VPKDQRVKYL QCCVRLFARI SSHHNQIENL FKYIILVQCS 300
  301 VSSILICMLL YKISTVLEVG WVWMGMIMVY FVTIALEITL YNVSAQKVES QSELLFHDWY 360
  361 NCSWYNESRE FKFMIKMMLL FSRRTFVLSV GGFTSLSHKF LVQVFRLSAN FFLLLRNMNN 420
  421 K

Type	Start	End	Confidence
Cytoplasmic	1	45	0.95
Transmembrane Helix	46	67	0.92
Non-Cytoplasmic	68	75	0.82
Transmembrane Helix	76	97	0.77
Cytoplasmic	98	152	0.79
Transmembrane Helix	153	168	0.70
Non-Cytoplasmic	169	217	0.84
Transmembrane Helix	218	238	0.88
Cytoplasmic	239	289	0.94
Transmembrane Helix	290	313	0.89
Non-Cytoplasmic	314	320	0.77
Transmembrane Helix	321	341	0.93
Cytoplasmic	342	379	0.92
Transmembrane Helix	380	402	0.81
Non-Cytoplasmic	403	421	0.84