YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	path-PA, FBpp0305997
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	69	0.74
Transmembrane Helix	70	90	0.77
Non-Cytoplasmic	91	91	0.33
Transmembrane Helix	92	114	0.77
Cytoplasmic	115	150	0.91
Transmembrane Helix	151	172	0.92
Non-Cytoplasmic	173	186	0.74
Transmembrane Helix	187	207	0.91
Cytoplasmic	208	213	0.80
Transmembrane Helix	214	236	0.89
Non-Cytoplasmic	237	252	0.89
Transmembrane Helix	253	273	0.91
Cytoplasmic	274	282	0.88
Transmembrane Helix	283	305	0.91
Non-Cytoplasmic	306	335	0.88
Transmembrane Helix	336	358	0.87
Cytoplasmic	359	373	0.88
Transmembrane Helix	374	394	0.92
Non-Cytoplasmic	395	399	0.76
Transmembrane Helix	400	421	0.94
Cytoplasmic	422	432	0.86
Transmembrane Helix	433	456	0.88
Non-Cytoplasmic	457	471	0.96

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNIVDSGSK HAPQEMEQFL PGEGKVMYKI QPRKSDTEQA LAGNDFDPFA LRDNPHPTTD  60
   61 NETLTHLLKA SLGTGILGMP FAFMCSGLIM GIFSTIFTAF ICTHCSYVLV KCGHKLYYRT 120
  121 RRTKMTFAEI AEAAFQKGPK WCRGFAPVAK FSILFGLFLT YFGTCSVYTV IVASNFEQLI 180
  181 SYWTGTAVSL RMLICIMLVP LILIAWVPNL KYLAPVSMVA NVFMGLGLGI TFYYLVQDLP 240
  241 PVEERESVVW STLPQFFSIT IFAMEAIGVV MPLENNMKTP QSFLGICGVL SQGMSGVTLI 300
  301 YMLLGFLGYL RYGSATGESI TLNLPIEEWP AQTVKVLISL AVYCTFGLQF FVCLEIIWDG 360
  361 IKEKCKKRPT LVNYVLRTVL VTAAVVLAVA VPTIGPFMGL IGAFCFSILG LIFPVVIELI 420
  421 VHWESGFGKY NWILWKNAII TLCGIGALVF GTQAAIKDIV KAYSNNENVG E