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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0306805, FBp...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFGLKLSCL WPSFLLWLTW SSGGGGGSGV GVSAQPSLTE KIPLGAIFEQ GTDEVQSAFK  60
   61 YAMLNHNLNV SSRRFELQAY VDVINTADAF KLSRLICNQF SRGVYSMLGA VSPDSFDTLH 120
  121 SYSNTFQMPF VTPWFPEKVL TPSSGFLDFA LSMRPDYHQA IIDTIQFYGW RKIIYLYDSH 180
  181 DGLLRLQQIY QGLRPGNESF QVELVKRISN VSMAIEFLHT LEQIGRFENK HIVLDCPTEM 240
  241 AKQILIQHVR DLRLGRRTYH YLLSGLVMDD RWESEIIEFG AINITGFRIV DTNRRLVREF 300
  301 YDSWKRLDPQ MSVGAGRESI SAQAALMYDA VFVLVEAFNK ILRKKPDQFR NNVQRRSQTL 360
  361 MVAQAAASTS SDGYNYSASG GGGGNGGAGG GFAGSDSGGS GGMASRALDC NTAKGWVNAW 420
  421 EHGDKISRYL RKVEIEGLTG DIKFNDDGRR VNYTLHVVEM TVNSAMVKVA EWNDDAGLQP 480
  481 LNAKYVRLRP HVEFEKNRTY IVTTVLEEPY IMLKQVAFGE KLHGNNRFEG YCKDLADLLA 540
  541 KELGINYELR LVKDGNYGSE KSSAHGGWDG MVGELVRKEA DIAIAAMTIT AERERVIDFS 600
  601 KPFMSLGISI MIKKPVKQTP GVFSFMNPLS QEIWVSVIFS YIGVSIVLFF VSRFSPHEWR 660
  661 LVQQQPQQSQ SPDPHAHHEQ LANQQPPGII GGAPLPAPPG PPTPGAQTAA GAAALQAALS 720
  721 AGSPGSGGSS SAVVNEFSVW NSFWFSLAAF MQQGCDLSPR SVSGRIAAAS WFFFTLILIS 780
  781 SYTANLAAFL TVERMVTPIN SPEDLAMQTE VQYGTLLHGS TWDFFRRSQI GLHNKMWEYM 840
  841 NSRKHVFVPT YDEGIKRVRN SKGKYALLVE SPKNEYVNAR EPCDTMKVGR NLDTKGFGIA 900
  901 TPLGSALKDP INLAVLTLKE NGELIKLRNK WWYEKAECST HKDGETSHSE LSLSNVAGIF 960
  961 YILIGGLLVS VFVAILEYCF RSRDSRSASS GSGMGLGMGL GGGMSGGSLG KANGSMMLGP1020
 1021 SSAVPGGMPS SHQRSTLTDT MHAKAKLTIQ ASRDYDNGRV GYLNCASLQY YPPAQLSATP1080
 1081 PDAGDSLHMN AHGQV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle