YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0306023, Srp...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKLNENARQ RKQIKLGEID TGPIIVALLL GFIAVAIFVI LRRRSAGRKD FLLTGLSESG  60
   61 KSAIFMQLIH GKFPATFTSI KENVGDYRTG SASARLVDIP GHYRVRDKCL ELYKHRAKGI 120
  121 VFVVDSVTAH KDIRDVADFL YTILSDSATQ PCSVLVLCNK QDQTTAKSAQ VIKSLLESEL 180
  181 HTVRDTRSRK LQSVGDEDGS KSITLGKPGR DFEFSHIAQN IQFAEASAKD TELDPLTDWL 240
  241 ARLL

Type	Start	End	Confidence
Cytoplasmic	1	20	0.71
Transmembrane Helix	21	41	0.95
Non-Cytoplasmic	42	244	0.77