YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG6486-PA, CG6486-PB
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTQTHTTTD RHGYSLRFSP FEANYLLLAT SQLYGLAGGG SLFLLEQNSN TNSSSTDGQS  60
   61 LGELCRLEWS DGLFDVAWCP YAADIAATAS GDGSLQIWCG LDGESASNQL TPKQPLICLQ 120
  121 EHKNEVYSLD WGEKWNYHTL LSGSWDCTLK LWDCNRQNSI TTFVGHNDLI YGAKFSPLIA 180
  181 NLFASVSTDG HLNLWNSLDF AGKPLMSIEA HASEALCCDW SHFDRNVLVT GGSDGLIRGW 240
  241 DLRKMRTHVF ELYSGEFAVR RLACSPHSAA VLASANYDFT TRIWNLERGE SAQEVNARHT 300
  301 EFVCGLDWNP HRTHQLADCG WDSLANVYTP QCLSGDLVV

Type	Start	End	Confidence
Cytoplasmic	1	22	0.67
Transmembrane Helix	23	45	0.65
Non-Cytoplasmic	46	339	0.98