YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Cpr66D-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLLLVTATL AICGVVVSGQ QGVDPAYLRQ YYQQLQQQQQ QQQAQPHDGT PIFEQNSEQT  60
   61 QQYVNSGQQI RIKDTVAEQI RAQQQQGYVA PSVRDYQQYQ PQQAAYRPPA QAAPQPPRRI 120
  121 QQSSYQAPST SILGKGQHKL SLQQQNEEEE YDDQNSSYQF GFDVKDDEFT NYQNRKEIRD 180
  181 GSVIKGSYSV VDSDGFIRTV KYTADPKEGF KAEVIREPTD IVVKIPTPPP PTQLLRAGGH 240
  241 KAQQEYSSGP SKQQYQHQQQ QQQPQYHQYQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	270	0.99