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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Cdc6-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVRRSTRL SSISKATAAS PLPPSTQTPR RSEVWKRRQP KKVLADSDEE EEVVTAIYDL  60
   61 TSPVSENNEN RNVLNKMDKI SRRRTSQVQV AQSELPKTPR STKKTVQSAG SSRAKREEEN 120
  121 REATARFLEG EQDSEVDPLH GSPPKQRKLQ PLPQHLISPS RLLDRLSIDE RQEEEVEATT 180
  181 HKTETAEQQP KHQAKDEAKP RPKQQEDPLA QKQQEKPPTK QPNKNQTKEK SNIQTNEETQ 240
  241 QNNLPSPSRN KYQNARRVLN SAETQNLPGR ESQLQELREF FSNHLESQTS GSLYVSGQPG 300
  301 TGKTACLSLL LRDPDFSKRL QRVYINCTSI ASVGAVYKKL CTELQLKVSG RTERDHLEAI 360
  361 QRHLKTAKRM LLLVLDEIDQ LCTSRQEVLY TIFEWPALPG SRILLVGIAN SLDLTDRALM 420
  421 RLNARCELKP RLMHFPPYSK QQIVEIFKSR LAEAEVLDVF PPVTLQLLAA KVSAISGDVR 480
  481 RALDIGRRVV EIAEQQKRDG EKEFNMKALQ LEGKDAVEAK EKQDTLKPVQ VTQVAAVLNK 540
  541 VYGASQNLEE DIEASFPLQQ KLMLCTLVLM LRNERNKDIS MGRLHEVYRR VCAKRNILAL 600
  601 DQAEFTGTVD LVETRGILRI MRKKEPRLHK VLLQWDEEEV HAALSDKQLI ASILSDTACL 660
  661 SK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle