YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG7188-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTANYIND RFQTFMNGLG DRYEPYVREH LSKVYMVLGS TAAATAMGAM LQMRDFLDLG  60
   61 VLAAVATLVL VLGLHFYKDD GKNYYTRLGM LYAFGFCSGQ TLGPLLGYIC SINPAIILSA 120
  121 LTGTFVTFIS LSLSALLAEQ GKYLYLGGML VSVINTMALL SLFNMVFKSY FVQVTQLYVG 180
  181 VFVMAAFIVY DTQNIVEKCR NGNRDVVQHA LDLFFDVLSM FRRLLIILTQ KEERKQNERR 240
  241 QNKTK

Type	Start	End	Confidence
Cytoplasmic	1	30	0.96
Transmembrane Helix	31	51	0.85
Non-Cytoplasmic	52	58	0.70
Transmembrane Helix	59	77	0.97
Cytoplasmic	78	87	0.80
Transmembrane Helix	88	108	0.91
Non-Cytoplasmic	109	114	0.72
Transmembrane Helix	115	137	0.90
Cytoplasmic	138	142	0.88
Transmembrane Helix	143	163	0.93
Non-Cytoplasmic	164	173	0.63
Transmembrane Helix	174	190	0.90
Cytoplasmic	191	245	0.86