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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7295233, gi|2...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAALAIRRD CPPPSVPSQD SSRTLHPTPD RMSTDSTQPH TPSHEVAVRP PPCAANQWKR  60
   61 AALMARMAPA FRETVSDDSE DEVDTKKQIK YGSGFQAAKA IIHEYCDYTT IHGIRYLGEK 120
  121 KRPLLERLFW ISVLVLSVFT CVKLTLNIWD KWNNNPVIVS FAEKSTPVWQ IPFPAVTVCP 180
  181 ETKTRREIFN FTDSYHQVRD FQSNVSGIVD LSDKQGMEII DALTEVSPHF DDTYLNCKWR 240
  241 NSPVKCSDIF HKFVTEDGVC FSFNSLSPAE IFRAEGIIPD FIFREENRLS MDWNVEDGYS 300
  301 ASADTSPYPN RVLGPGARAG LYLFMGGAEI DFDDMCRGPV QGFKILLHTP GDVAQVSKQY 360
  361 FRIPFDQEVL ISIRPKIITT SDGLKHYEPN RRQCYFQKER ELRYFNIYSQ SNCELECLAN 420
  421 FTLTKCGCVK FSMPRNVNMP VCGDASLKCY NQAEDELLLR EFTQGLVNAG ENTRGETECN 480
  481 CLPSCTSIAY EAEISQADFD YKTVINTDSP EGKEEQSKRQ GMKMSRVSIF FKEAQFLTSR 540
  541 RSELYGTTDF LANCGGLLGL FMGVSMLSIV ELIYFCTVRL ISNLRMRRKT RKELLKAVNK 600
  601 DA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle