YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23094024, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLVVTLLVL SLTVSVGEKN KLSPRIAGGY RAKTFTIIYL VGIVYFKSQT SSLNYGAGTI  60
   61 ISNQWILTVK TVLKYSYIEV HLASRRSYRG FDIIRIYKEN FRFHYDNDHV IALVKCPYQK 120
  121 FDRRMDRVRV PAYDTRFERY VGNMTMVCGY GTEKRHAKLP EWMRCIEVEV MNNTECAKYY 180
  181 TPLKWYEMCT SGEGFKGVCE GDIGGAVVTM GPNPTFIGII WLMPENCSIG YPSVHIRVSD 240
  241 HIKWIKRVSG VGFCEYSKYE LFFFY

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	265	0.99