YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG14823-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPTCSSSVA ELAKYSEDDV ETDESKVVEH QEYAEALSMS GESRKRKRWT RRSCCTRQVL  60
   61 STGAIFIALL LIIGAIYMHL RQKHHLGRLH INLKDRGQVE VLEEDFPMVT AAGVDAQTST 120
  121 ITTFQPPPTS SPEPSAKCLD CMATTATDNI PAICRHRGRP EEPCGIYRIS HVYWQDALRI 180
  181 IDPDDSLARD YGRCVVDVQC AERIVRSYVQ RYGGEDCNGD GRIECRDHVR LHMRGPGGCR 240
  241 RQEPLGSLSE RRLENCLKYR GIT

Type	Start	End	Confidence
Cytoplasmic	1	53	0.98
Transmembrane Helix	54	78	0.91
Non-Cytoplasmic	79	263	0.98