YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	zpg-PA, FBpp0303218
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYAAVKPLSK YLQFKSVHIY DAIFTLHSKV TVALLLACTF LLSSKQYFGD PIQCFGDKDM  60
   61 DYVHAFCWIY GAYVSDNVTV TPLRNGAAQC RPDAVSKVVP PENRNYITYY QWVVLVLLLE 120
  121 SFVFYMPAFL WKIWEGGRLK HLCDDFHKMA VCKDKSRTHL RVLVNYFSSD YKETHFRYFV 180
  181 SYVFCEILNL SISILNFLLL DVFFGGFWGR YRNALLSLYN GDYNQWNIIT MAVFPKCAKC 240
  241 EMYKGGPSGS SNIYDYLCLL PLNILNEKIF AFLWIWFILV AMLISLKFLY RLATVLYPGM 300
  301 RLQLLRARAR FMPKKHLQVA LRNCSFGDWF VLMRVGNNIS PELFRKLLEE LYEAQSLIKI 360
  361 PPGADKI

Type	Start	End	Confidence
Cytoplasmic	1	20	0.82
Transmembrane Helix	21	43	0.74
Non-Cytoplasmic	44	108	0.89
Transmembrane Helix	109	131	0.88
Cytoplasmic	132	177	0.92
Transmembrane Helix	178	200	0.82
Non-Cytoplasmic	201	269	0.88
Transmembrane Helix	270	290	0.93
Cytoplasmic	291	367	0.86