YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG32412-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIGSVVFAA AGLLLLLLPP SHQQATAGNI GSQWRDDEVH FNRTLDSILV PRVVGSRGHQ  60
   61 QVREYLVQSL NGLGFQTEVD EFKQRVPVFG ELTFANVVGT INPQAQNFLA LACHYDSKYF 120
  121 PNDPGFVGAT DSAVPCAILL NTAKTLGAYL QKEFRNRSDV GLMLIFFDGE EAFKEWTDAD 180
  181 SVYGSKHLAA KLASKRSGSQ AQLAPRNIDR IEVLVLLDLI GARNPKFSSF YENTDGLHSS 240
  241 LVQIEKSLRT AGQLEGNNNM FLSRVSGGLV DDDHRPFLDE NVPVLHLVAT PFPDVWHTPR 300
  301 DNAANLHWPS IRNFNRVFRN FVYQYLKRHT SPVNLRFYRT

Type	Start	End	Confidence
Signal Peptide	1	27	0.94
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	340	0.99