YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG5592-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	25	0.54
Transmembrane Helix	26	50	0.86
Cytoplasmic	51	137	0.55
Transmembrane Helix	138	161	0.87
Non-Cytoplasmic	162	193	0.37
Transmembrane Helix	194	216	0.74
Cytoplasmic	217	225	0.79
Transmembrane Helix	226	248	0.92
Non-Cytoplasmic	249	254	0.73
Transmembrane Helix	255	274	0.93
Cytoplasmic	275	341	0.85
Transmembrane Helix	342	361	0.91
Non-Cytoplasmic	362	372	0.79
Transmembrane Helix	373	395	0.91
Cytoplasmic	396	402	0.83
Transmembrane Helix	403	424	0.86
Non-Cytoplasmic	425	430	0.62
Transmembrane Helix	431	449	0.51
Cytoplasmic	450	458	0.44
Transmembrane Helix	459	481	0.84
Non-Cytoplasmic	482	488	0.44
Transmembrane Helix	489	508	0.95
Cytoplasmic	509	540	0.53

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRDCEKYE NFLLFIGDFG PFQKRLLFWM MPAAFLFAFT YFGQIFMILL PKNHWCRVRE  60
   61 LEGLPESEQK NRGIPKKQDG SFENCFMYNV PYDSNATNDA NQTRSPIPCN NGWIYDRKEV 120
  121 PYESIATEYN WVCDKRDFGT YSVVVYFVGC IVGCLCFGFI TDHSGRLPAL FLANSCSMIG 180
  181 GCVSVVCKDF PCFAASRFVA GLSMNYCFVP IYILTLENVG IKYRTLVGNL ALTFFFTLGA 240
  241 CLLPWLAYVI SNWRHYAMVV ALPIVFMILT SLLAPESPSW LMSVGKVDRC IEVMKEAAKA 300
  301 NGKIISEEVW SEMRECYELK FANEQLGKQY TSLDLFKTFP RLVVLTILIV TWMTVALAYD 360
  361 AHVRVVEILD TDIFITFSLS SLVEIPAGIV PMLLLDRIGR KPMMSAVMLL CAASSLFVGI 420
  421 LKGHWNASTA AIAARFFATM AYNVGQQWAS EILPTVLRGQ GLAIINIMGQ MGALLSPLVL 480
  481 STHRYYRPLP MFIITLVSVI GALIILFLPE TKGATMPQTL DEAEKRWTLR CRDRKINEDL 540
  541