YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	membrin-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLYHQTNN VVKDIERDFQ RLSQLSAQES LDVENGIQLK ITQANANCDR LDVLLYKVPP  60
   61 SQRQSSKLRV DQLKYDLRHL QTSLQTARER RQRRMQEISE REQLLNHRFT ANSAQPEETR 120
  121 LQLDYELQHH TQLGNAHRGV DDMIASGSGI LESLISQRMT LGGAHKRIQA IGSTLGLSNH 180
  181 TMKLIERRLV EDRRIFIGGV VVTLLIIALI IYFLVL

Type	Start	End	Confidence
Cytoplasmic	1	194	0.92
Transmembrane Helix	195	215	0.95
Non-Cytoplasmic	216	216	0.94