YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0297223, CG4...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.46
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATLRRFHG LRLLKSAPAL SLQQAKNLSS AGSWASGNKK LIGALGAITG GVGALIYALE  60
   61 QSVQASGGEV HSPAQLWNHK GLFDALDHQS VRRGYEVYKQ VCSACHSMQY IAYRNLVGVT 120
  121 HTEAEAKAEA EQITVKDGPD DTGNYYTRPG KLSDYFPSPY PNEEAARAAN NGAYPPDLSY 180
  181 IVSARKGGED YIFSLLTGYH DAPAGVVLRE GQYFNPYFPG GAISMAQVLY NEVIEYEDGT 240
  241 PPTQSQLAKD VATFLKWTSE PEHDDRKQLL IKVIGILGFL TVISYYIKRH KWSSLKSRKI 300
  301 VFVPKEK

Type	Start	End	Confidence
Signal Peptide	1	31	0.54
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	268	0.92
Transmembrane Helix	269	288	0.79
Cytoplasmic	289	307	0.79