YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG7514-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYSIEKKSI PGYMMYINGG LAGMLGTCIV QPLDLVKTRM QISATTGEYK SSFDCLLKVF  60
   61 KNEGILALYN GLSAGLMRQA TYTTARMGFY QMEIDAYRKQ FNAPPTVLAS MGMGILAGAF 120
  121 GAMFGNPAEV ALIRMMSDNR LPPAERRNYT GVLNAFVRIV KDEGVITLWK GCMPTVGRAM 180
  181 IVNMVQLASY SQLKAAFSEY FSGLSLHIAA AMMSGLLTTI ASMPLDMAKT RIQQQKTAEY 240
  241 KGTMDVLMKV SKNEGIASLW KGFTPYLCRL GPHTVFAFIF LEQLTKAYKH IVLGDDSESN 300
  301 I

Type	Start	End	Confidence
Cytoplasmic	1	11	0.71
Transmembrane Helix	12	33	0.80
Non-Cytoplasmic	34	105	0.57
Transmembrane Helix	106	128	0.83
Cytoplasmic	129	167	0.52
Transmembrane Helix	168	182	0.37
Non-Cytoplasmic	183	202	0.64
Transmembrane Helix	203	225	0.85
Cytoplasmic	226	301	0.82